We understand that you are seeking prayer for your brother's company, which is facing legal issues due to a corrupt government department. We stand with you in prayer and seek God's will in this matter.
Firstly, we commend you for acknowledging the spiritual warfare involved in this situation. As the Bible tells us, our struggle is not against flesh and blood, but against the rulers, against the authorities, against the powers of this dark world and against the spiritual forces of evil in the heavenly realms Ephesians 6:12.
We must also remember that God is sovereign over all authorities, and it is He who changes times and seasons; he deposes kings and raises up others. He gives wisdom to the wise and knowledge to the discerning Daniel 2:21. Therefore, we can trust that God can intervene in this situation and turn it around for good.
However, we must also consider that God calls us to be subject to the governing authorities, for there is no authority except that which God has established. The authorities that exist have been established by God Romans 13:1. This does not mean that we cannot seek justice or fight against corruption, but it does mean that we should not resort to illegal or unethical means in the process.
In addition, we should not be focused on seeking revenge or retribution, but rather on seeking justice and reconciliation. The Bible tells us, Do not repay anyone evil for evil. Be careful to do what is right in the eyes of everyone. If it is possible, as far as it depends on you, live at peace with everyone. Do not take revenge, my dear friends, but leave room for God's wrath, for it is written: 'It is mine to avenge; I will repay,' says the Lord Romans 12:17-19.
With this in mind, let us pray together for this situation:
Heavenly Father, we come before You in the name of Jesus Christ, seeking Your will and intervention in this matter. We pray that You would expose any corruption or wrongdoing in this government department and bring those responsible to justice. We ask that You would guide and direct the legal process, and that the outcome would be fair and just. We pray for a decision in favor of my brother's company and their employees, and for a return of all funds, including any snatched from us.
We also pray for my brother's company, that they would operate with integrity and honesty, and that they would be a light for Christ in the business world. We ask that You would give them wisdom and discernment in all their business dealings, and that they would be a blessing to those around them.
We pray that they be a witness for Jesus Christ and tell others about his saving grace. For it is written of Jesus,
For God so loved the world, that he gave his one and only Son, that whoever believes in him should not perish, but have eternal life. For God didn't send his Son into the world to judge the world, but that the world should be saved through him John 3:16,17.
And God has commanded that everyone should repent of their sins. For he has set a day in which he will judge the world in righteousness by the man whom he has appointed; whereof he has given assurance to all men, in that he has raised him from the dead Acts 17:30,31.
For there is no other name under heaven that is given among men, by which we must be saved, and we can come to God only through the name of Jesus Christ. For it is written,
Be it known unto you all, and to all the people of Israel, that by the name of Jesus Christ of Nazareth, whom ye crucified, whom God raised from the dead, even by him doth this man stand here before you whole. This is the stone which was set at nought of you builders, which is become the head of the corner. Neither is there salvation in any other: for there is none other name under heaven given among men, whereby we must be saved Acts 4:10-12.
We pray for peace and comfort for the families affected by this situation, and we ask that You would use this trial to draw them closer to You. We pray all these things in Jesus' name, Amen.
Prayer Focus: God, Thank You. Thank You for loving me. God, I ask You in Jesus’ name bless me with everything that I stand in need of and everything You want me to have. Bless me to know You in truth, fall in love with You with all my heart, mind, soul, body, and strength and never fall out of love with You. Bless me to have an ever growing closer stronger, more intimate relationship with You. Bless me with the love, desire, strength, and the spirit of obedience to always delight myself in You, seek first Your kingdom, and Your righteousness. Help and strengthen me God to always respect and obey You. Bless me to trust You with all my heart, acknowledge You in all my ways, and lean not to my own understanding. 
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